Sarcoglycan epsilon (SGCE) - 3173 nt intron 10 reference sequence

Contains alternatively spliced exon 10b.

(intronic numbering for coding DNA Reference Sequence)


         .         .         .         .         .         .  g.72581
gtgagtgctaagaataataaattaatgtttatgaatgaatctaatagattaaaagataat  c.1297+60

         .         .         .         .         .         .  g.72641
tatggcactatataatttatgaagctttatcttcaccaaataaggcaaaacacttgtgtc  c.1297+120

         .         .         .         .         .         .  g.72701
attccttaatcagacttaaaacctcagaataatagcttagattattacatagattggcat  c.1297+180

         .         .         .         .         .         .  g.72761
cagaatgataaacacagggtaaatgatcttagagcaaaagcatccatggaggtcctgtct  c.1297+240

         .         .         .         .         .         .  g.72821
aattaaggaagactgaatgaaacccctttccttcagtgaagttccctattcttccccttg  c.1297+300

         .         .         .         .         .         .  g.72881
gtatgaaagattcttagcttggatgcatccaggatttgtctcagtaagtgagcagcttga  c.1297+360

         .         .         .         .         .         .  g.72941
agtttcaagctctcttacaaaaggaaaccattgtgactaatcactgaggcttcaggggga  c.1297+420

         .         .         .         .         .         .  g.73001
taaatgagaaatggctggcctggttttaaagccgctttaaaaagctgttataacatgacc  c.1297+480

         .         .         .         .         .         .  g.73061
aatgacaacaagatggcggacaattctccttggattattctatttccctaagacttgctt  c.1297+540

         .         .         .         .         .         .  g.73121
tctttatttctttcaagtgtccctaaaaattttccacagccaattatttcattcatctct  c.1297+600

         .         .         .         .         .         .  g.73181
atactgagtagataacttattcatgattgtcttctaattagtggttgattcctagttcta  c.1297+660

         .         .         .         .         .         .  g.73241
attgccagggaaccattaatgcctttgtagctcttttggaaaagcaagagaagttttaaa  c.1297+720

         .         .         .         .         .         .  g.73301
aatgtaagttgggtgtggaattctgagtatgaatagcggcattgtggtagggaaactatt  c.1297+780

         .         .         .         .         .         .  g.73361
aagtaagtctcttaaaaacttcaggcacattcagaaatgtgttggatgttttcattcaga  c.1297+840


         .         .         .         10b.         .         .  g.73421
aattatcttctctattactgctttcgtgaatttaag | gagattttcgtttgacaacttttc  c.1297+900
                                         D  F  R  L  T  T  F  Q  p.433+8
                                     alternatively spliced exon 10b

         .            .         .         .         .         .  g.73481
aaagatttgag | gcaagtataatgaaattgttcatcagatttcaattacaagatgtttatc  c.1297+960
  R  F  E                                                        p.433+11

         .         .         .         .         .         .  g.73541
agaatttttccctacaattttgattacttgctttaattaaatgctaacatgtttcaacaa  c.1297+1020

         .         .         .         .         .         .  g.73601
gactgttcaatatattgatgtgttggtgctactttgtaagcattcaggagattgatgaag  c.1297+1080

         .         .         .         .         .         .  g.73661
gaacaaactttgttataaaaatgagtcacctaaagagagaaaaaagataaatgaatccct  c.1297+1140

         .         .         .         .         .         .  g.73721
actaccactaatttcacagctattttttaaaaggaaaatttctaaaagaatacttctacg  c.1297+1200

         .         .         .         .         .         .  g.73781
atagaaatgatagaacttcttcgttattaaccttgtagcttccatctcgcctaagatttc  c.1297+1260

         .         .         .         .         .         .  g.73841
tatcttctgattcttaattatttcaggcatggagtgagtaggaagcaggcaatttctaga  c.1297+1320

         .         .         .         .         .         .  g.73901
aaaacagtaaatatttattttgagtatttaaaaatccagattttacttacttacccacta  c.1297+1380

         .         .         .         .         .         .  g.73961
ggggaattaggaaacttgagtagatgatattagggcaatttgtttagtagtcacatagat  c.1297+1440

         .         .         .         .         .         .  g.74021
tttttagcaagtactcttgttaacttgctacattttagtaatacagagcacttccaaata  c.1297+1500

         .         .         .         .         .         .  g.74081
caaggacaatttatgcctaaacaaatataagagccaaagagttttcctaggggattttaa  c.1297+1560

         .         .         g.74108
ggttgtttaacctaatttataaaatta  c.1297+1587

--------------------- middle of intron ---------------------
                     g.74109            .         .           g.74134
                     c.1298-1586  tttttctgaaacagattttagggagc  c.1298-1561

.         .         .         .         .         .           g.74194
aggtattttgcttgagtcaagaaagctttgctctcctttttagttaacactagagcctat  c.1298-1501

.         .         .         .         .         .           g.74254
taccttcttgttttcttacatttttctgcaatttggatcatattatagactaaagtacag  c.1298-1441

.         .         .         .         .         .           g.74314
tatctcctcttggttgttttgttgttattgttttatttagtgagtccccaaaatatctta  c.1298-1381

.         .         .         .         .         .           g.74374
agtgccaaagggagagagaccaccctagcatttttttttataattatgcaagattggtgt  c.1298-1321

.         .         .         .         .         .           g.74434
gtttgtgcctctggtacatttaaaactaaatggaggctgggtgcggtggctcacacctgt  c.1298-1261

.         .         .         .         .         .           g.74494
aatcccagcactttgggaggccaaggcaggcggatcacctgaggtcaggagttcaagacc  c.1298-1201

.         .         .         .         .         .           g.74554
agcctgcccgacatggcgaagccctgtctctactaaaaaaatacaaaaattagctgggca  c.1298-1141

.         .         .         .         .         .           g.74614
tggtggcatacacctgtaatcccagctacttgggaggctgaggcagaaaaatcacttgaa  c.1298-1081

.         .         .         .         .         .           g.74674
cctgggaggtggaggttgcagtgagccaagatcacgccattgtactccagcctgggcaac  c.1298-1021

.         .         .         .         .         .           g.74734
agagtgagactctgaatcaaaaaaagaaaaaaaagaaaaaagaaaacctaaatggaggca  c.1298-961

.         .         .         .         .         .           g.74794
tgcctcctggagagaagggctgatgggcagtttacattccttatttccattctgttcatt  c.1298-901

.         .         .         .         .         .           g.74854
taaatgaaaaagtttatttctcaatttctaaattcttctatctgaaaatgcatggattta  c.1298-841

.         .         .         .         .         .           g.74914
gtgctgtttatatatttttgtgagtacggcagcttttcttttcttttaccctgattatcc  c.1298-781

.         .         .         .         .         .           g.74974
taatactgcatagaggcagctacatttatgcatgattatcatcaaacagtaactggagtt  c.1298-721

.         .         .         .         .         .           g.75034
ttccaagtaccacagaacattatgcacatgtcagttttctttatgaaggtaatttaggca  c.1298-661

.         .         .         .         .         .           g.75094
caagagtttgcgtcttggataccaagtaattttatttgtagctacctatatggaatttat  c.1298-601

.         .         .         .         .         .           g.75154
caggggaaagtatatcttgaagttgttgttttttttttttttttttttttttttcattta  c.1298-541

.         .         .         .         .         .           g.75214
gttccttgttttcttttaaattcctatcaaagctttaagaaatgaactagctgctggtgt  c.1298-481

.         .         .         .         .         .           g.75274
tgtgttcctggacttgagcactagctgggataatagagcagttaaaagctgacaattgca  c.1298-421

.         .         .         .         .         .           g.75334
ctaacttttggactaggcccaaaccattaggtttgatgccccttcaggttttctcatttt  c.1298-361

.         .         .         .         .         .           g.75394
ctctgccctaccagcccacatgatatttttttaaaagccacgattaaaaggtacagttat  c.1298-301

.         .         .         .         .         .           g.75454
acatcctgcagttaacctccattctttttgtttattgtgggaggaattttcagactgtac  c.1298-241

.         .         .         .         .         .           g.75514
ctcttgggaaatacaaaatattatagctttggtccaagaaggagaagactaatttagaat  c.1298-181

.         .         .         .         .         .           g.75574
tttttcttttgttttctgttttttaaaaaaaccaaatacagagaaataatgcaatgtaat  c.1298-121

.         .         .         .         .         .           g.75634
tattttacattgtattaagaagatggaaactttctccttgccataatttgctttgctcaa  c.1298-61

.         .         .         .         .         .           g.75694
aatctaaaagtatccatgccctgactaactcctgcccatattcattcttacacattgcag  c.1298-1


Powered by LOVDv.2.0-16 Build 16
©2004-2009 Leiden University Medical Center