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Program 4th ArrayNL workshop

Friday, April 27, 2001 - Utrecht


Date
Friday, April 27
Place
Wentgebouw ["de ponskaart"], blauwe collegezaal, Sorbonnelaan 16, UTRECHT
Travel directions Public transport:   from Utrecht CS, bus 12S (12) stops in front of the building (main entrance Wentgebouw on other side building).
Parking:   behind Wentgebouw.
Route description

Organisation

Peter Groot (logistics), Johan den Dunnen and Judith Boer

Thanks to the generous support of our sponsors, coffee, tea, lunch and drinks will all be free


Program

  9.30 - 10.00 WELCOME / COFFEE

10.00 - 10.15

Timo Breit

Introduction to the Micro-Array Division (MAD) at the UvA

Micro-Array Divisie, Swammerdam Instituut of Life Sciences, University of Amsterdam
10.15 - 10.30 Judith Boer Array-related developments in the Leiden Genome Technology Center (LGTC)
Leiden Genome Technology Center, Dept. Human and Clinical Genetics, Leiden University Medical Center, Leiden
10.30 - 10.45 Dirk van Alewijk The NKI / AvL - KWF Central Microarray Facility
10.45 - 11.00 Ad Geurts van Kessel The arrayCGH taskforce: an update
Ad Geurts van Kessel, Joris Veltman, Tony van Kampen, Eric Schoenmakers / and on behalf of the ArrayCGH Taskforce
Antropogenetica, UMC Nijmegen
11.00 - 11.20 Rolf Turk Controls in cDNA microarray experiments
Rolf Turk, Ellen Sterrenburg, Judith Boer, GertJan van Ommen, Johan den Dunnen.
Human and Clinical Genetics / Leiden Genome Technology Center, Leiden University Medical Center, Leiden
11.20 - 11.45 Frank Schuren The TNO approach towards bioinformatics in applied genomics research
Applied Microbiology and Gene Technology, TNO Nutrition & Food Research Institute, Zeist
11.45 - 12.05 Eugene van Someren Finding networks of regulatory interaction between genes from microarray data
Eugene van Someren, Lodewijk Wessels and Marcel Reinders
Information and Communication Theory Group, Delft University of Technology
12.15 - 13.30 LUNCH

13.30 - 13.50

Paul Eilers

Classification of tumors with penalized logistic regression on microarray data

Medical Statistics, Leiden University Medical Center
13.50 - 14.10 Jan Lankelma Analysis of multiple data sets after repetitive hybridizations on nylon membranes
Jan Lankelma1,2, Jorrit J. Hornberg1 , Richard R. de Haas2 , Henk Dekker2
1Tumor Cell Biology, Vrije Universiteit, Amsterdam; 2VU Medical Center, Medical Oncology, Amsterdam
14.10 - 14.30 Nicole van Hal Methodological aspects of cDNA microarray construction and hybridisation on silylated glass slides
Nicole L.W. van Hal1, Oscar Vorst2, Evelien Kramer1, Robert D. Hall2, Jaap Keijer1
1RIKILT (State Institute for Quality Control of Agricultural Products), Gene Expression and Detection Centre, Wageningen; 2Plant Research International, Gene Expression and Detection Centre, Wageningen
14.30 - 14.50 Anton Horrevoets Beyond genehunting: use of a custom micro-array as analytical tool in the study of human disease
Anton Horrevoets, Rob Dekker, Simone van Soest en Hans Pannekoek
Molecular Cardiology Program, Depts. Biochemistry and Vascular Medicine, Academic Medical Center, Amsterdam.
14.50 - 15.15 TEA

15.15 -15.40

Lambert Dorssers

Analysis of gene expression in oestrogen-dependent and independent breast cancer cells

Lambert C.J. Dorssers and Koen J. Dechering1
Josephine Nefkens Institute, Department of Pathology, AZR/EUR, Rotterdam; 1Target Discovery, N.V. Organon, Oss
15.40 -16.00 Wilma Steegenga Large-scale gene expression analysis during early and late phase osteoblast differentiation
Diana S. de Jong1, Bart Veas1, José M.A. Hendriks1, Everardus J.J. van Zoelen2, Susanne Bauerschmidt3, Wiebe Olijve1,3 and Wilma T. Steegenga1
Depts. 1Applied Biology and 2Cell Biology University of Nijmegen, Nijmegen; 3N.V. Organon, Target Discovery Unit, Oss
16.00 - 16.20 Andreas Rühlmann New generation of DNA microarrays and gene expression bioinformatics
Agilent Technologies
16.20 - ..... CLOSE / DRINKS


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