ArrayNL platform©

3rd ArrayNL workshop

Tuesday September 26, 2000 - Utrecht


Date
Tuesday, September 26
Place UMC Utrecht, AZU (main building), roze college zaal (will be indicated with signs from the main entrance)
Sponsor
Perkin Elmer Life Sciences
Travel directions Route to UMCU / Parking (good alternative in front of the Hubrecht laboratory at the Sporthal [Uppsalalaan] parking free but 10-15 minute walk to UMC)
Information
Johan den Dunnen  (ddunnen@lumc.nl)
Frank Holstege  (f.c.p.holstege@med.uu.nl)


Coffee, tea, lunch and drinks will all be free thanks to the generous support of Perkin Elmer Life Sciences


PROGRAM

9.30-10.00 WELCOME / COFFEE


10.00-10.20

10.20-10.40
Chip/array facilities

Chip and micro-array facilities in the Leiden Genome Technology Center:  an update
Judith Boer (LGTC, Leiden)
The KWF-facility at the NKI:  an update
Ron Kerkhoven (NKI, Amsterdam)
10.40-11.10 Lessons learnt from developing a cDNA microarray for S.cerevisiae
Frank Holstege (Genomics Laboratory, UMC Utrecht)


11.10-11.25

11.25-11.40
Task Force ArrayCGH

Detection of deletions/duplications using MAPH: an alternative for genome-wide arrayCGH ?
Stefan White (Human & Clinical Genetics, LUMC, Leiden)
Update from the Task Force ArrayCGH
Ad Geurts van Kessel (Human & Clinical Genetics, Nijmegen)
11.40-12.00 The use of streptavidin-coated slides in microarray technology
Clemens Prinsen (Pathology, Nijmegen)
12.00-12.20 Transcriptome mapping of chemostat grown yeast: timecourse analysis of transitions from glucose to oleic acid (Marian Groot Koerkamp, Guy Hardy, Adri Mul, Martijn Rep, Henk Tabak)
Marian Groot Koerkamp (Biochemistry, University of Amsterdam, AMC, Amsterdam)

12.20-13.30

LUNCH  -
donated by Perkin Elmer Life Sciences
13.30-13.50 Validation of high through-put protein interaction data with clustered expression profiles
Patrick Kemmeren (Genomics Laboratory, UMC Utrecht)
13.50-14.15 Applications of arrayCGH in research and diagnostics
Joris Veltman (Human Genetics, Nijmegen)
14.15-14.40 The peroxisome proliferator activated receptor alpha regulates the hepatic response to fasting, as assessed by oligonucleotide micro-array
Sander Kersten (PRI, Wageningen)
14.40-15.05 Analysing downstream effects of monogenic disorders causing CAD using the Affymetrix GeneChip system
Harald Funke  (Institut für Klinische Chemie und Laboratoriumsmedizin, Münster, Germany)
15.05-15.30 TEA / COFFEE
15.30-16.20 Robust expression profiling of small numbers of cells using referenced amplification: applications in colon tumor development and primordial germ cell studies
David de Graaf  (MIT/Whitehead Institute, Center for Genome Research, Cambridge, USA) - ddgraaf@mac.com
16.20-16.50 Flow through microarray: a fast and flexible concept for a DNA-chip
Henk van Damme  (PamGene, Boxtel)
16.50-..... CLOSE / DRINKS


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