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ArrayNL - second meeting

 

Second ArrayNL meeting

Date Thursday afternoon, March 23                             (free entrance)
Place Collegezaal C102, Androclus gebouw, Yalelaan 1, de Uithof, Utrecht
(travel directions)
Information Johan den Dunnen  (ddunnen@lumc.nl)
Bernard van Oost  (B.vanOost@vet.uu.nl)

 

PROGRAM

13.30-14.00 Welcome / Coffee
14.00-14.25 Analysis of gene expression in prostate cancer cell lines and xenografts using UniGEM V GeneChips
Guido Jenster (Dept. Urology, Josephine Nefkens Institute, EUR)
14.25-14.50 Finding Upstream Regulatory Motifs without Clustering
Harmen Bussemaker (Swammerdam Institute for Life Sciences, UvA)
14.50-15.00 The CMBI and array technology; possibilities for support
Gert Vriend (CMBI, KU Nijmegen)
15.00-15.10 The KWF central micro-array facility
Rene Bernards (Molec. Carcinogenesis, NKI, Amsterdam)
15.10-15.20 The Affymetrix GeneChipTM system in the LUMC
Judith Boer (Leiden Genome Technology Center, LUMC)
15.20-16.30 Learning the tricks (practical experiences in NL) - Workshop/discussion organized by Peter Groot and Klaas Kok
Short contributions about: -what is being done, -problems encountered, -systems, materials tested -Questionaire
  1. A microarray to study a mouse model of allergic asthma
    Peter Groot, Jeroen v Bergenhenegouwen, Antoon v Oosterhout (Dept. Pharmacology, UIPS, UU Utrecht)
  2. Construction and analysis of a cardiovascular microarray
    Simone van Soest, Hans Pannekoek, Anton Horrevoets (AMC, Afd Biochemie, UvA, Amsterdam)
  3. DNA-array based comparative genomic hybridisations
    Klaas Kok (Dept. Medical Genetics, Univ. Groningen)
  4. Installing and working with Scanalyze
    Viktor de Jager (Leiden Genome Technology Center - LUMC)
  5. Experiences with amino-linker modified oligonucleotides and PCR-products
    Frank van der Loop (Microarray Facility, Univ. Maastricht)
  6. The use of ULS-labeled RNA probes on cDNA arrays
    Marjolein Schalk (KREATECH Diagnostics Amsterdam / Molecular Cell Biology, LUMC / NEN Life Science Products, Boston)
  7. Linear Amplification of mRNA
    Ron Kerkhoven (Microarray Facility, NKI, Amsterdam)
16.30-..... Close / Drinks

The coffee / drinks are kindly donated by Westburg

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