(last modified January 31, 2004)
NOTE: complete genomic Reference Sequence (3.5 Mb file) available on request.
LOCUS DMD_gene 2586749 bp DNA linear PRI
DEFINITION Homo sapiens
ACCESSION DMD_gene
VERSION
KEYWORDS
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Unclassified.
FEATURES Location/Qualifiers
source 1..2586749
/organism="Homo sapiens"
/mol_type="genomic DNA"
misc_feature complement(1..139258)
/note="from GenBank AL050305"
misc_feature 15790..15802
/note="SfiI-A site"
gene complement(51665..52734)
/gene="pseudogene similar to Lysosome-associated
membrane glycoprotein (LAMP)"
/pseudo
STS 112325..112568
/standard_name="CA-repat 5'DYS-III"
/note="GenBank AF209165"
STS complement(120377..120633)
/standard_name="CA-repeat 5'DYS-I"
/note="GenBank AF209163"
STS 123204..123411
/standard_name="CA-repeat 5'DYS-II (DXS1242,
sWXD2450)"
/note="GenBank AF209164"
exon 124226..124576
/number=Dp427c exon 1
STS 128456..128657
/standard_name="CA-repeat 5'DYS-IV"
/note="GenBank AF209166"
misc_feature complement(139159..273047)
/note="from GenBank AL031643"
misc_feature 163173..163185
/note="SfiI-B site"
STS 244455..244551
/standard_name="CA-repeat 5'DYS MSB (DXS1243,
sWXD2452)"
mRNA join(252279..252553,443635..443696,614015..614107,
618975..619052,640448..640540,647195..647367,
654224..654342,764542..764723,765837..765965,
818683..818871,819522..819703,849382..849532,
867959..868078,889989..890090,890198..890305,
897954..898133,918501..918676,945704..945827,
961993..962080,972317..972558,978736..978916,
991526..991671,995125..995337,999136..999249,
1000241..1000396,1009003..1009173,1015197..1015379,
1022521..1022655,1025445..1025594,1051922..1052083,
1073654..1073764,1074161..1074334,1077370..1077525,
1083155..1083325,1098636..1098815,1099125..1099253,
1100877..1101047,1115307..1115429,1117755..1117892,
1120549..1120701,1121553..1121735,1153559..1153753,
1176134..1176306,1246737..1246884,1495286..1495461,
1531573..1531720,1534055..1534204,1588427..1588612,
1626981..1627082,1643717..1643825,1689608..1689840,
1734052..1734169,1784214..1784425,1805656..1805810,
1835938..1836127,1956347..1956519,1966856..1967012,
1984697..1984817,1985426..1985694,2019173..2019319,
2115166..2115244,2140142..2140202,2202784..2202845,
2240679..2240753,2254101..2254302,2257133..2257218,
2259682..2259839,2280896..2281062,2283319..2283430,
2284995..2285131,2285830..2285868,2290196..2290261,
2291387..2291452,2294199..2294357,2316282..2316525,
2317386..2317509,2329606..2329698,2337127..2337158,
2341870..2344572)
/product="Dp427m"
exon 252279..252553
/number=Dp427m exon 1
STS 265662..266078
/standard_name="pERT84 (DXS142)"
/note="GenBank L37425"
STS complement(267981..268232)
/standard_name="CA-repeat 5'DYS MSA (5'-5n1,
DXS1243)"
/note="GenBank X75920"
misc_feature complement(272948..391641)
/note="from GenBank AL109943"
exon 335407..335688
/number=Dp427p exon 1
STS 346349..346432
/standard_name="5'-5n3 (5' segment)"
/note="5' segment GenBank X75801"
exon 385001..385748
/standard_name="cryptic exon X (spliced in
blood-derived RNA)"
/note="GenBank L06900"
misc_feature complement(391542..407925)
/note="from GenBank AL139401"
misc_feature complement(407826..508040)
/note="from GenBank AL451144"
exon 443635..443696
/number=2
STS 480191..480374
/standard_name="CA-repeat 5'-5n3"
/note="3' segment of GenBank X75801"
misc_feature complement(507941..595005)
/note="from GenBank AL121880"
misc_feature complement(594906..797911)
/note="from GenBank AL096699"
exon 614015..614107
/number=3
exon 618975..619052
/number=4
STS 632057..632215
/standard_name="CA-repeat 5'-5n4"
/note="GenBank X77678"
exon 640448..640540
/number=5
exon 647195..647367
/number=6
exon 654224..654342
/number=7
STS 676412..676640
/standard_name="CA-repeat DMDSTR07A"
/note="see http://www.DMD.nl/"
STS 677573..677806
/standard_name="CA-repeat DMDSTR07B"
/note="see http://www.DMD.nl/"
exon 764542..764723
/number=8
exon 765837..765965
/number=9
exon 818683..818871
/number=10
exon 819522..819703
/number=11
misc_feature 829626..829638
/note="SfiI-C site"
exon 849382..849532
/number=12
STS 865171..865588
/standard_name="pERT87-1 (DXS164)"
exon 867959..868078
/number=13
STS 881119..881262
/standard_name="pERT87-8 (DXS164)"
/note="GenBank L05531"
exon 889989..890090
/number=14
exon 890198..890305
/number=15
exon 897954..898133
/number=16
misc_feature 912110..913209
/note="from GenBank AL596023"
misc_feature complement(912440..1044728)
/note="from GenBank AL031542"
STS 918281..920050
/standard_name="pERT87-15 (DXS164)"
/note="from GenBank L05532"
exon 918501..918676
/number=17
exon 945704..945827
/number=18
exon 961993..962080
/number=19
exon 972317..972558
/number=20
exon 978736..978916
/number=21
exon 991526..991671
/number=22
exon 995125..995337
/number=23
exon 999136..999249
/number=24
exon 1000241..1000396
/number=25
STS complement(1007171..1007337)
/standard_name="CA-repeat 5'-7n4"
/note="GenBank X77677"
exon 1009003..1009173
/number=26
exon 1015197..1015379
/number=27
exon 1022521..1022655
/number=28
exon 1025445..1025594
/number=29
misc_feature 1030345..1030357
/note="SfiI-D site"
misc_feature complement(1044629..1153727)
/note="from GenBank AL109609"
exon <1051585..1051673
/number=Dp260 exon 1
exon 1051922..1052083
/number=30
exon 1073654..1073764
/number=31
exon 1074161..1074334
/number=32
exon 1077370..1077525
/number=33
exon 1083155..1083325
/number=34
exon 1098636..1098815
/number=35
exon 1099125..1099253
/number=36
exon 1100877..1101047
/number=37
exon 1115307..1115429
/number=38
exon 1117755..1117892
/number=39
exon 1120549..1120701
/number=40
exon 1121553..1121735
/number=41
misc_feature 1148476..1148488
/note="SfiI-E site"
exon 1153559..1153753
/number=42
misc_feature complement(1153628..1249470)
/note="from GenBank AL139278"
misc_feature 1158085..1158097
/note="SfiI-E' site"
exon 1176134..1176306
/number=43
exon 1246737..1246884
/number=44
misc_feature complement(1249371..1293088)
/note="from GenBank AC096506"
STS complement(1258700..1258881)
/standard_name="DXS1238 (STR-44)"
misc_feature 1290984..1489069
/note="from GenBank AC078957"
STS 1307097..1307277
/standard_name="CA-repeat IVS44SK12"
STS 1307702..1307938
/standard_name="CA-repeat IVS44SK21"
/note="GenBank X77644"
exon <1308331..1308429
/number=Dp140 exon 1
STS complement(1400489..1400718)
/standard_name="DXS1219 (sWXD1257, AFM297yd1)"
STS 1436489..1436710
/standard_name="CA-repeat P20"
STS 1446218..1449219
/standard_name="P20a (DXS269)"
/note="GenBank AF209182"
STS 1483138..1484285
/standard_name="P20b (DXS269)"
/note="GenBank AF209182"
misc_feature complement(1487982..1570982)
/note="from GenBank AC093193"
exon 1495286..1495461
/number=exon 45
STS complement(1496359..1496532)
/standard_name="DXS1237 (STR-45.1)"
/note="GenBank AF209158"
STS 1498777..1499328
/standard_name="STR-45.2 (CA-repeat)"
/note="GenBank AF209159"
exon 1531573..1531720
/number=46
exon 1534055..1534204
/number=47
misc_feature complement(1568337..1730210)
/note="from GenBank AC079864"
exon 1588427..1588612
/number=48
misc_feature 1592201..1592213
/note="SfiI-F site"
STS complement(1601783..1601891)
/standard_name="DXS997 (AFM217xa5)"
STS 1617207..1617937
/standard_name="STR-48"
/note="GenBank AF209160"
exon 1626981..1627082
/number=49
STS 1641056..1641288
/standard_name="DXS1236 (STR-49)"
/note="GenBank AF209161"
exon 1643717..1643825
/number=50
STS complement(1684007..1684248)
/standard_name="DXS1235 (STR-50), overlaps
DXS1067 (AFM234vg7)"
/note="GenBank AF209162 and Z23710"
exon 1689608..1689840
/number=51
STS complement(1707243..1707391)
/standard_name="DXS1036 (AFM072h3)"
/note="GenBank Z23325"
misc_feature complement(1728642..1803642)
/note="from GenBank AC093167"
exon 1734052..1734169
/number=52
exon 1784214..1784425
/number=53
misc_feature 1801572..1964768
/note="from GenBank AC079175"
exon 1805656..1805810
/number=54
misc_feature 1811813..1811825
/note="SfiI-G site"
exon 1835938..1836127
/number=55
exon <1955502..1955592
/number=Dp116 exon 1
exon 1956347..1956519
/number=56
misc_feature complement(1962769..2118301)
/note="from GenBank AC079177"
exon 1966856..1967012
/number=57
exon 1984697..1984817
/number=58
exon 1985426..1985694
/number=59
STS 1985874..1986124
/standard_name="CA-repeat DMD1-2c (DXS1241)"
/note="GenBank X55151"
exon 2019173..2019319
/number=60
STS 2041420..2042539
/standard_name="VNTR J66"
STS complement(2042699..2042900)
/standard_name="J66 (DXS268)"
/note="GenBank Z11861"
misc_feature 2051949..2051961
/note="SfiI-H site"
misc_feature 2114546..2114558
/note="SfiI-I site"
exon 2115166..2115244
/number=61
misc_feature 2116800..2150639
/note="from GenBank AC090632"
misc_feature 2127806..2127818
/note="SfiI-I' site"
exon 2140142..2140202
/number=62
misc_feature complement(2148667..2336212)
/note="from GenBank AC078958"
exon <2196893..2196990
/standard_name="Dp71/Dp40 exon 1"
exon 2202784..2202845
/number=63
STS 2206932..2207138
/standard_name="CA-repeat STR62/63"
STS 2220912..2221123
/standard_name="CA-repeat AFM283wg9 (DXS1214)"
/note="GenBank Z24023"
exon 2240679..2240753
/number=64
exon 2254101..2254302
/number=65
exon 2257133..2257218
/number=66
exon 2259682..2259839
/number=67
exon 2280896..2281062
/number=68
exon 2283319..2283430
/number=69
exon 2284995..2285131
/number=70
exon 2285830..2285868
/number=71
exon 2290196..2290261
/number=72
exon 2291387..2291452
/number=73
exon 2294199..2294357
/number=74
exon 2316282..2316525
/number=75
exon 2317386..2317509
/number=76
exon 2329606..2329698
/number=77
misc_feature complement(2334212..2339514)
/note="from GenBank AC079143"
exon 2337127..2337158
/number=78
misc_feature complement(2337517..2435572)
/note="from GenBank AC006061"
exon 2341870..2344572
/number=79
STS 2342272..2342404
/standard_name="CA-repeat 3'DYS MS (DXS1234)"
STS 2342887..2342955
/standard_name="TTGA-repeat MP1P (DXS503)"
STS 2353883..2354166
/standard_name="CA-repeat DXS726"
misc_feature complement(2435370..2586749)
/note="from GenBank AC117405"
STS 2534440..2534587
/standard_name="CA-repeat 3'-19n8"
/note="from GenBank X75580"
BASE COUNT 802444 a 469758 c 479764 g 834783 t
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