(used for mutation description)
(last modified December 11, 2011)
This file was created to facilitate the description of sequence variants in the DYSF gene based on a coding DNA reference sequence. To strictly follow the HGVS recommendations the coding DNA reference sequence should include all exons that still give a transcript with an open reading frame. However, originally variants in the DYSF gene have been described using transcript variant 8 (NM_003494.3) as a reference. This transcript does not include alternatively spliced exons 5b and 40b that were discovered later. To allow users to trace back original reports, we have decided to show variants in the database in relation to both reference sequences, NM_003494.3 and as HGVS recommended. For the latter, NCBI does not yet contain a reference sequence so we have created one for these pages (see HGVS recommended).
Intron 1 contains an alternative promoter/first exon (exon
1b) encoding a unique 30 amino acid
N-terminal sequence. Exon 17 and 49/50 are also alternatively spliced. Pramono
et al (2009) measured transcript levels of all these forms largely differing
in relative frequencies between skeletal muscle and blood.
NOTE: the database was updated December 11, 2011 to give
descriptions in relation to both NM_003494.3
and HGVS recommended.
(upstream sequence)
. g.5016
gcggccgccgcccagc c.-361
. . . . . . g.5076
caggtgcaaaatgccgtgtcattgggagactccgcagccggagcattagattacagctcg c.-301
. . . . . . g.5136
acggagctcgggaagggcggcgggggtggaagatgagcagaagcccctgttctcggaacg c.-241
. . . . . . g.5196
ccggctgacaagcggggtgagcgcagccggggcggggacccagcctagcccactggagca c.-181
. . . . . . g.5256
gccgggggtggcccgttcccctttaagagcaactgctctaagccaggagccagagattcg c.-121
. . . . . . g.5316
agccggcctcgcccagccagccctctccagcgaggggacccacaagcggcgcctcggccc c.-61
. . . . . . g.5376
tcccgacctttccgagccctctttgcgccctgggcgcacggggccctacacgcgccaagc c.-1
. . . . . . g.5436
ATGCTGAGGGTCTTCATCCTCTATGCCGAGAACGTCCACACACCCGACACCGACATCAGC c.60
M L R V F I L Y A E N V H T P D T D I S p.20
. . | 02 . . . g.32292
GATGCCTACTGCTCCGCGGTGTTTGCAG | GGGTGAAGAAGAGAACCAAAGTCATCAAGAAC c.120
D A Y C S A V F A G | V K K R T K V I K N p.40
^ alternatively promoter/first exon 01b
. . | 03 . . . . g.33292
AGCGTGAACCCTGTATGGAATGAG | GGATTTGAATGGGACCTCAAGGGCATCCCCCTGGAC c.180
S V N P V W N E | G F E W D L K G I P L D p.60
. . . . . | 04 . g.54595
CAGGGCTCTGAGCTTCATGTGGTGGTCAAAGACCATGAGACGATGGGGAGGAACAG | GTTC c.240
Q G S E L H V V V K D H E T M G R N R | F p.80
. . . . . . g.54655
CTGGGGGAAGCCAAGGTCCCACTCCGAGAGGTCCTCGCCACCCCTAGTCTGTCCGCCAGC c.300
L G E A K V P L R E V L A T P S L S A S p.100
. . . . | 05 . . g.63202
TTCAATGCCCCCCTGCTGGACACCAAGAAGCAGCCCACAGGG | GCCTCGCTGGTCCTGCAG c.360
F N A P L L D T K K Q P T G | A S L V L Q p.120
. . . . . . g.63262
GTGTCCTACACACCGCTGCCTGGAGCTGTGCCCCTGTTCCCGCCCCCTACTCCTCTGGAG c.420
V S Y T P L P G A V P L F P P P T P L E p.140
. . . | 06. . . g.65116
CCCTCCCCGACTCTGCCTGACCTGGATGTAGTGGCAG | ACACAGGAGGAGAGGAAGACACA c.480
P S P T L P D L D V V A D | T G G E E D T p.160
^ alternatively spliced exon 05b
. . . . . . g.65176
GAGGACCAGGGACTCACTGGAGATGAGGCGGAGCCATTCCTGGATCAAAGCGGAGGCCCG c.540
E D Q G L T G D E A E P F L D Q S G G P p.180
. . . . . . g.65236
GGGGCTCCCACCACCCCAAGGAAACTACCTTCACGTCCTCCGCCCCACTACCCCGGGATC c.600
G A P T T P R K L P S R P P P H Y P G I p.200
. . . . . . g.65296
AAAAGAAAGCGAAGTGCGCCTACATCTAGAAAGCTGCTGTCAGACAAACCGCAGGATTTC c.660
K R K R S A P T S R K L L S D K P Q D F p.220
| 07 . . . . . . g.67057
CAG | ATCAGGGTCCAGGTGATCGAGGGGCGCCAGCTGCCGGGGGTGAACATCAAGCCTGTG c.720
Q | I R V Q V I E G R Q L P G V N I K P V p.240
. . . . . . g.67117
GTCAAGGTTACCGCTGCAGGGCAGACCAAGCGGACGCGGATCCACAAGGGAAACAGCCCA c.780
V K V T A A G Q T K R T R I H K G N S P p.260
. | 08 . . . . . g.67605
CTCTTCAATGAG | ACTCTTTTCTTCAACTTGTTTGACTCTCCTGGGGAGCTGTTTGATGAG c.840
L F N E | T L F F N L F D S P G E L F D E p.280
. | 09 . . . . . g.68411
CCCATCTTTATCACG | GTGGTAGACTCTCGTTCTCTCAGGACAGATGCTCTCCTCGGGGAG c.900
P I F I T | V V D S R S L R T D A L L G E p.300
| 10 . . . | 11. . . g.72189
TTCCGG | ATGGACGTGGGCACCATTTACAGAGAGCCCC | GGCACGCCTATCTCAGGAAGTGG c.960
F R | M D V G T I Y R E P R | H A Y L R K W p.320
. . . . . . g.72249
CTGCTGCTCTCAGACCCTGATGACTTCTCTGCTGGGGCCAGAGGCTACCTGAAAACAAGC c.1020
L L L S D P D D F S A G A R G Y L K T S p.340
. . . | 12 . . . g.77624
CTTTGTGTGCTGGGGCCTGGGGACGAAGCGCCT | CTGGAGAGAAAAGACCCCTCTGAAGAC c.1080
L C V L G P G D E A P | L E R K D P S E D p.360
. . . . . . g.77684
AAGGAGGACATTGAAAGCAACCTGCTCCGGCCCACAGGCGTAGCCCTGCGAGGAGCCCAC c.1140
K E D I E S N L L R P T G V A L R G A H p.380
. . . . | 13 . . g.79695
TTCTGCCTGAAGGTCTTCCGGGCCGAGGACTTGCCGCAGA | TGGACGATGCCGTGATGGAC c.1200
F C L K V F R A E D L P Q M | D D A V M D p.400
. . . . . . g.79755
AACGTGAAACAGATCTTTGGCTTCGAGAGTAACAAGAAGAACTTGGTGGACCCCTTTGTG c.1260
N V K Q I F G F E S N K K N L V D P F V p.420
. . | 14 . . . . g.86434
GAGGTCAGCTTTGCGGGGAAAATG | CTGTGCAGCAAGATCTTGGAGAAGACGGCCAACCCT c.1320
E V S F A G K M | L C S K I L E K T A N P p.440
. . . | 15 . . . g.86672
CAGTGGAACCAGAACATCACACTGCCTGCCATG | TTTCCCTCCATGTGCGAAAAAATGAGG c.1380
Q W N Q N I T L P A M | F P S M C E K M R p.460
. | 16. . . . . g.90577
ATTCGTATCATAGACTG | GGACCGCCTGACTCACAATGACATCGTGGCTACCACCTACCTG c.1440
I R I I D W | D R L T H N D I V A T T Y L p.480
. . . . | 17 . . g.100747
AGTATGTCGAAAATCTCTGCCCCTGGAGGAGAAATAGAAG | AGGAGCCTGCAGGTGCTGTC c.1500
S M S K I S A P G G E I E E | E P A G A V p.500
. . | 18 . . . . g.102456
AAGCCTTCGAAAGCCTCAGACT | TGGATGACTACCTGGGCTTCCTCCCCACTTTTGGGCCC c.1560
K P S K A S D L | D D Y L G F L P T F G P p.520
. . . . . . g.102516
TGCTACATCAACCTCTATGGCAGTCCCAGAGAGTTCACAGGCTTCCCAGACCCCTACACA c.1620
C Y I N L Y G S P R E F T G F P D P Y T p.540
. | 19 . . . . g.103026
GAGCTCAACACAGGCAAG | GGGGAAGGTGTGGCTTATCGTGGCCGGCTTCTGCTCTCCCTG c.1680
E L N T G K | G E G V A Y R G R L L L S L p.560
. . . . . . g.103086
GAGACCAAGCTGGTGGAGCACAGTGAACAGAAGGTGGAGGACCTTCCTGCGGATGACATC c.1740
E T K L V E H S E Q K V E D L P A D D I p.580
. | 20 . . . . . g.104436
CTCCGGGTGGAG | AAGTACCTTAGGAGGCGCAAGTACTCCCTGTTTGCGGCCTTCTACTCA c.1800
L R V E | K Y L R R R K Y S L F A A F Y S p.600
. . . . . . g.104496
GCCACCATGCTGCAGGATGTGGATGATGCCATCCAGTTTGAGGTCAGCATCGGGAACTAC c.1860
A T M L Q D V D D A I Q F E V S I G N Y p.620
. . . . . . g.104556
GGGAACAAGTTCGACATGACCTGCCTGCCGCTGGCCTCCACCACTCAGTACAGCCGTGCA c.1920
G N K F D M T C L P L A S T T Q Y S R A p.640
. | 21 . . . . . g.105234
GTCTTTGACG | GGTGCCACTACTACTACCTACCCTGGGGTAACGTGAAACCTGTGGTGGTG c.1980
V F D G | C H Y Y Y L P W G N V K P V V V p.660
. . . . . . g.105294
CTGTCATCCTACTGGGAGGACATCAGCCATAGAATCGAGACTCAGAACCAGCTGCTTGGG c.2040
L S S Y W E D I S H R I E T Q N Q L L G p.680
. | 22 . . . . . g.107387
ATTGCTGACCGGCTG | GAAGCTGGCCTGGAGCAGGTCCACCTGGCCCTGAAGGCGCAGTGC c.2100
I A D R L | E A G L E Q V H L A L K A Q C p.700
. . . . . . g.107447
TCCACGGAGGACGTGGACTCGCTGGTGGCTCAGCTGACGGATGAGCTCATCGCAGGCTGC c.2160
S T E D V D S L V A Q L T D E L I A G C p.720
| 23 . . . . . . g.113187
AG | CCAGCCTCTGGGTGACATCCATGAGACACCCTCTGCCACCCACCTGGACCAGTACCTG c.2220
S | Q P L G D I H E T P S A T H L D Q Y L p.740
. . . . . . g.113247
TACCAGCTGCGCACCCATCACCTGAGCCAAATCACTGAGGCTGCCCTGGCCCTGAAGCTC c.2280
Y Q L R T H H L S Q I T E A A L A L K L p.760
. . . . . . g.113307
GGCCACAGTGAGCTCCCTGCAGCTCTGGAGCAGGCGGAGGACTGGCTCCTGCGTCTGCGT c.2340
G H S E L P A A L E Q A E D W L L R L R p.780
. | 24 . . . . . g.115480
GCCCTGGCAGAGGAG | CCCCAGAACAGCCTGCCGGACATCGTCATCTGGATGCTGCAGGGA c.2400
A L A E E | P Q N S L P D I V I W M L Q G p.800
. . . . . . g.115540
GACAAGCGTGTGGCATACCAGCGGGTGCCCGCCCACCAAGTCCTCTTCTCCCGGCGGGGT c.2460
D K R V A Y Q R V P A H Q V L F S R R G p.820
. . . . . | 25 . g.119337
GCCAACTACTGTGGCAAGAATTGTGGGAAGCTACAGACAATCTTTCTGAAA | TATCCGATG c.2520
A N Y C G K N C G K L Q T I F L K | Y P M p.840
. . . . . . g.119397
GAGAAGGTGCCTGGCGCCCGGATGCCAGTGCAGATACGGGTCAAGCTGTGGTTTGGGCTC c.2580
E K V P G A R M P V Q I R V K L W F G L p.860
. . . . . . g.119457
TCAGTGGATGAGAAGGAGTTCAACCAGTTTGCTGAGGGGAAGCTGTCTGTCTTTGCTGAA c.2640
S V D E K E F N Q F A E G K L S V F A E p.880
| 26 . . . . . . g.119606
ACC | TATGAGAACGAGACTAAGTTGGCCCTTGTTGGGAACTGGGGCACAACGGGCCTCACC c.2700
T | Y E N E T K L A L V G N W G T T G L T p.900
. . . . . . g.119666
TACCCCAAGTTTTCTGACGTCACGGGCAAGATCAAGCTACCCAAGGACAGCTTCCGCCCC c.2760
Y P K F S D V T G K I K L P K D S F R P p.920
. . . . . | 27 . g.121207
TCGGCCGGCTGGACCTGGGCTGGAGATTGGTTCGTGTGTCCGGAGAAGAC | TCTGCTCCAT c.2820
S A G W T W A G D W F V C P E K T | L L H p.940
. . . . . . g.121267
GACATGGACGCCGGTCACCTGAGCTTCGTGGAAGAGGTGTTTGAGAACCAGACCCGGCTT c.2880
D M D A G H L S F V E E V F E N Q T R L p.960
. . . . | 28 . . g.121621
CCCGGAGGCCAGTGGATCTACATGAGTGACAACTACACCGATGTG | AACGGGGAGAAGGTG c.2940
P G G Q W I Y M S D N Y T D V | N G E K V p.980
. . . . . . g.121681
CTTCCCAAGGATGACATTGAGTGCCCACTGGGCTGGAAGTGGGAAGATGAGGAATGGTCC c.3000
L P K D D I E C P L G W K W E D E E W S p.1000
. . . | 29 . . . g.122005
ACAGACCTCAACCGGGCTGTCGATGAGCAAG | GCTGGGAGTATAGCATCACCATCCCCCCG c.3060
T D L N R A V D E Q G | W E Y S I T I P P p.1020
. . . . . . g.122065
GAGCGGAAGCCGAAGCACTGGGTCCCTGCTGAGAAGATGTACTACACACACCGACGGCGG c.3120
E R K P K H W V P A E K M Y Y T H R R R p.1040
. . . . . | 30 . g.125581
CGCTGGGTGCGCCTGCGCAGGAGGGATCTCAGCCAAATGGAAGCACTGAAAAGG | CACAGG c.3180
R W V R L R R R D L S Q M E A L K R | H R p.1060
. . . . . . g.125641
CAGGCGGAGGCGGAGGGCGAGGGCTGGGAGTACGCCTCTCTTTTTGGCTGGAAGTTCCAC c.3240
Q A E A E G E G W E Y A S L F G W K F H p.1080
. . . . . . g.125701
CTCGAGTACCGCAAGACAGATGCCTTCCGCCGCCGCCGCTGGCGCCGTCGCATGGAGCCA c.3300
L E Y R K T D A F R R R R W R R R M E P p.1100
. . . . | 31 . g.140982
CTGGAGAAGACGGGGCCTGCAGCTGTGTTTGCCCTTGAGGGGGCCCTG | GGCGGCGTGATG c.3360
L E K T G P A A V F A L E G A L | G G V M p.1120
. . . . . . g.141042
GATGACAAGAGTGAAGATTCCATGTCCGTCTCCACCTTGAGCTTCGGTGTGAACAGACCC c.3420
D D K S E D S M S V S T L S F G V N R P p.1140
. . | 32 . . . . g.141626
ACGATTTCCTGCATATTCGACT | ATGGGAACCGCTACCATCTACGCTGCTACATGTACCAG c.3480
T I S C I F D Y | G N R Y H L R C Y M Y Q p.1160
. . . . | 33 . . g.149961
GCCCGGGACCTGGCTGCGATGGACAAGGACTCTTTTTCTG | ATCCCTATGCCATCGTCTCC c.3540
A R D L A A M D K D S F S D | P Y A I V S p.1180
. . . . . . g.150021
TTCCTGCACCAGAGCCAGAAGACGGTGGTGGTGAAGAACACCCTTAACCCCACCTGGGAC c.3600
F L H Q S Q K T V V V K N T L N P T W D p.1200
. . . . . . g.150081
CAGACGCTCATCTTCTACGAGATCGAGATCTTTGGCGAGCCGGCCACAGTTGCTGAGCAA c.3660
Q T L I F Y E I E I F G E P A T V A E Q p.1220
. . . . | 34 . . g.152097
CCGCCCAGCATTGTGGTGGAGCTGTACGACCATGACACTTAT | GGTGCAGACGAGTTTATG c.3720
P P S I V V E L Y D H D T Y | G A D E F M p.1240
. . . . . . g.152157
GGTCGCTGCATCTGTCAACCGAGTCTGGAACGGATGCCACGGCTGGCCTGGTTCCCACTG c.3780
G R C I C Q P S L E R M P R L A W F P L p.1260
. . . . . . g.152217
ACGAGGGGCAGCCAGCCGTCGGGGGAGCTGCTGGCCTCTTTTGAGCTCATCCAGAGAGAG c.3840
T R G S Q P S G E L L A S F E L I Q R E p.1280
| 35 . . . | 36 . . . g.154180
AAG | CCGGCCATCCACCATATTCCTGGTTTTGAG | GTGCAGGAGACATCAAGGATCCTGGAT c.3900
K | P A I H H I P G F E | V Q E T S R I L D p.1300
| 37 . . . . . . g.162679
GAG | TCTGAGGACACAGACCTGCCCTACCCACCACCCCAGAGGGAGGCCAACATCTACATG c.3960
E | S E D T D L P Y P P P Q R E A N I Y M p.1320
. . . . | 38 . . g.162857
GTTCCTCAGAACATCAAGCCAGCGCTCCAGCGTACCGCCATCGAG | ATCCTGGCATGGGGC c.4020
V P Q N I K P A L Q R T A I E | I L A W G p.1340
. . . . . . g.162917
CTGCGGAACATGAAGAGTTACCAGCTGGCCAACATCTCCTCCCCCAGCCTCGTGGTAGAG c.4080
L R N M K S Y Q L A N I S S P S L V V E p.1360
. . . . . . g.162977
TGTGGGGGCCAGACGGTGCAGTCCTGTGTCATCAGGAACCTCCGGAAGAACCCCAACTTT c.4140
C G G Q T V Q S C V I R N L R K N P N F p.1380
. . | 39. . . . g.164051
GACATCTGCACCCTCTTCATGGAAGTG | ATGCTGCCCAGGGAGGAGCTCTACTGCCCCCCC c.4200
D I C T L F M E V | M L P R E E L Y C P P p.1400
. . . . . . g.164111
ATCACCGTCAAGGTCATCGATAACCGCCAGTTTGGCCGCCGGCCTGTGGTGGGCCAGTGT c.4260
I T V K V I D N R Q F G R R P V V G Q C p.1420
. . . . . . g.164171
ACCATCCGCTCCCTGGAGAGCTTCCTGTGTGACCCCTACTCGGCGGAGAGTCCATCCCCA c.4320
T I R S L E S F L C D P Y S A E S P S P p.1440
. | 40 . . . . . g.164758
CAGGGTGGCCCAG | ACGATGTGAGCCTACTCAGTCCTGGGGAAGACGTGCTCATCGACATT c.4380
Q G G P D | D V S L L S P G E D V L I D I p.1460
. . . | 41 . . . g.195372
GATGACAAGGAGCCCCTCATCCCCATCCAG | GAGGAAGAGTTCATCGATTGGTGGAGCAAA c.4440
D D K E P L I P I Q | E E E F I D W W S K p.1480
^ alternatively spliced exon 40b
. . . . . . g.195432
TTCTTTGCCTCCATAGGGGAGAGGGAAAAGTGCGGCTCCTACCTGGAGAAGGATTTTGAC c.4500
F F A S I G E R E K C G S Y L E K D F D p.1500
| 42 . . . . . g.207590
ACCCTGAAG | GTCTATGACACACAGCTGGAGAATGTGGAGGCCTTTGAGGGCCTGTCTGAC c.4560
T L K | V Y D T Q L E N V E A F E G L S D p.1520
. . . . . . g.207650
TTTTGTAACACCTTCAAGCTGTACCGGGGCAAGACGCAGGAGGAGACAGAAGATCCATCT c.4620
F C N T F K L Y R G K T Q E E T E D P S p.1540
. | 43 . . . . g.210297
GTGATTGGTGAATTTAAG | GGCCTCTTCAAAATTTATCCCCTCCCAGAAGACCCAGCCATC c.4680
V I G E F K | G L F K I Y P L P E D P A I p.1560
. . . . . . g.210357
CCCATGCCCCCAAGACAGTTCCACCAGCTGGCCGCCCAGGGACCCCAGGAGTGCTTGGTC c.4740
P M P P R Q F H Q L A A Q G P Q E C L V p.1580
. . . . . | 44 . g.211943
CGTATCTACATTGTCCGAGCATTTGGCCTGCAGCCCAAGGACCCCAATGGAAAG | TGTGAT c.4800
R I Y I V R A F G L Q P K D P N G K | C D p.1600
. . . . . . g.212003
CCTTACATCAAGATCTCCATAGGGAAGAAATCAGTGAGTGACCAGGATAACTACATCCCC c.4860
P Y I K I S I G K K S V S D Q D N Y I P p.1620
. . | 45 . . . . g.215679
TGCACGCTGGAGCCCGTATTTGGAAA | GATGTTCGAGCTGACCTGCACTCTGCCTCTGGAG c.4920
C T L E P V F G K | M F E L T C T L P L E p.1640
. . . . . . g.215739
AAGGACCTAAAGATCACTCTCTATGACTATGACCTCCTCTCCAAGGACGAAAAGATCGGT c.4980
K D L K I T L Y D Y D L L S K D E K I G p.1660
. . . . . . g.215799
GAGACGGTCGTCGACCTGGAGAACAGGCTGCTGTCCAAGTTTGGGGCTCGCTGTGGACTC c.5040
E T V V D L E N R L L S K F G A R C G L p.1680
. | 46. . . . . g.216582
CCACAGACCTACTGTGT | CTCTGGACCGAACCAGTGGCGGGACCAGCTCCGCCCCTCCCAG c.5100
P Q T Y C V | S G P N Q W R D Q L R P S Q p.1700
. . . . . . g.216642
CTCCTCCACCTCTTCTGCCAGCAGCATAGAGTCAAGGCACCTGTGTACCGGACAGACCGT c.5160
L L H L F C Q Q H R V K A P V Y R T D R p.1720
. . . . | 47 . . g.218773
GTAATGTTTCAGGATAAAGAATATTCCATTGAAGAGATAG | AGGCTGGCAGGATCCCAAAC c.5220
V M F Q D K E Y S I E E I E | A G R I P N p.1740
. . . . . . g.218833
CCACACCTGGGCCCAGTGGAGGAGCGTCTGGCTCTGCATGTGCTTCAGCAGCAGGGCCTG c.5280
P H L G P V E E R L A L H V L Q Q Q G L p.1760
. . . . . . g.218893
GTCCCGGAGCACGTGGAGTCACGGCCCCTCTACAGCCCCCTGCAGCCAGACATCGAGCAG c.5340
V P E H V E S R P L Y S P L Q P D I E Q p.1780
| 48 . . . . . . g.220191
| GGGAAGCTGCAGATGTGGGTCGACCTATTTCCGAAGGCCCTGGGGCGGCCTGGACCTCCC c.5400
| G K L Q M W V D L F P K A L G R P G P P p.1800
. . | 49 . . . g.220520
TTCAACATCACCCCACGGAGAGCCAGAAG | GTTTTTCCTGCGTTGTATTATCTGGAATACC c.5460
F N I T P R R A R R | F F L R C I I W N T p.1820
. . . . . . g.220580
AGAGATGTGATCCTGGATGACCTGAGCCTCACGGGGGAGAAGATGAGCGACATTTATGTG c.5520
R D V I L D D L S L T G E K M S D I Y V p.1840
| 50 . . . . . . g.221037
AAAGG | TTGGATGATTGGCTTTGAAGAACACAAGCAAAAGACAGACGTGCATTATCGTTCC c.5580
K G | W M I G F E E H K Q K T D V H Y R S p.1860
. . . . . . g.221097
CTGGGAGGTGAAGGCAACTTCAACTGGAGGTTCATTTTCCCCTTCGACTACCTGCCAGCT c.5640
L G G E G N F N W R F I F P F D Y L P A p.1880
. . | 51. . . . g.225607
GAGCAAGTCTGTACCATTGCCAAGAAG | GATGCCTTCTGGAGGCTGGACAAGACTGAGAGC c.5700
E Q V C T I A K K | D A F W R L D K T E S p.1900
. . . . . . g.225667
AAAATCCCAGCACGAGTGGTGTTCCAGATCTGGGACAATGACAAGTTCTCCTTTGATGAT c.5760
K I P A R V V F Q I W D N D K F S F D D p.1920
| 52. . . . . . g.230487
TTTCTGG | GCTCCCTGCAGCTCGATCTCAACCGCATGCCCAAGCCAGCCAAGACAGCCAAG c.5820
F L G | S L Q L D L N R M P K P A K T A K p.1940
. . . . . . g.230547
AAGTGCTCCTTGGACCAGCTGGATGATGCTTTCCACCCAGAATGGTTTGTGTCCCTTTTT c.5880
K C S L D Q L D D A F H P E W F V S L F p.1960
. . . . . . g.230607
GAGCAGAAAACAGTGAAGGGCTGGTGGCCCTGTGTAGCAGAAGAGGGTGAGAAGAAAATA c.5940
E Q K T V K G W W P C V A E E G E K K I p.1980
| 53 . . . . . . g.232432
CTGGCG | GGCAAGCTGGAAATGACCTTGGAGATTGTAGCAGAGAGTGAGCATGAGGAGCGG c.6000
L A | G K L E M T L E I V A E S E H E E R p.2000
. . . . . | 54 . g.233911
CCTGCTGGCCAGGGCCGGGATGAGCCCAACATGAACCCTAAGCTTGAGGACCCAAG | GCGC c.6060
P A G Q G R D E P N M N P K L E D P R | R p.2020
. . . . . . g.233971
CCCGACACCTCCTTCCTGTGGTTTACCTCCCCATACAAGACCATGAAGTTCATCCTGTGG c.6120
P D T S F L W F T S P Y K T M K F I L W p.2040
. . . . . . g.234031
CGGCGTTTCCGGTGGGCCATCATCCTCTTCATCATCCTCTTCATCCTGCTGCTGTTCCTG c.6180
R R F R W A I I L F I I L F I L L L F L p.2060
. . | 55 . . . . g.237867
GCCATCTTCATCTACGCCTTCCCG | AACTATGCTGCCATGAAGCTGGTGAAGCCCTTCAGC c.6240
A I F I Y A F P | N Y A A M K L V K P F S p.2080
g.237870
TGA c.6243
X p.2080
. . . . . . g.237930
ggactctcctgccctgtagaaggggccgtggggtcccctccagcatgggactggcctgcc c.*60
. . . . . . g.237990
tcctccgcccagctcggcgagctcctccagacctcctaggcctgattgtcctgccagggt c.*120
. . . . . . g.238050
gggcagacagacagatggaccggcccacactcccagagttgctaacatggagctctgaga c.*180
. . . . . . g.238110
tcaccccacttccatcatttccttctcccccaacccaacgcttttttggatcagctcaga c.*240
. . . g.238141
catatttcagtataaaacagttggaaccaca c.*271
(downstream sequence)
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